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15 lines
650 B
Text
15 lines
650 B
Text
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CAP3: A DNA sequence assembly program.
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CAP3 if the third generation of the CAP sequence assembly program. The
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program has a capability to clip 5' and 3' low-quality regions of reads.
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It uses base quality values in computation of overlaps between reads,
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construction of multiple sequence alignments of reads, and generation
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of consensus sequences. The program also uses forward-reverse constraints
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to correct assembly errors and link contigs.
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This just repackages the binaries provided from upstream.
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If you use CAP3 in any published work, please cite:
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Huang, X. and Madan, A. (1999) CAP3: A DNA sequence assembly program.
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Genome Res., 9, 868-877.
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