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14 lines
613 B
Text
14 lines
613 B
Text
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Trapnell C, Pachter L, Salzberg SL. TopHat: discovering splice
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junctions with RNA-Seq. Bioinformatics doi:10.1093/bioinformatics/btp120
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Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-
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efficient alignment of short DNA sequences to the human genome. Genome
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Biology 10:R25.
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Kim D and Salzberg SL. TopHat-Fusion: an algorithm for discovery of
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novel fusion transcripts. Genome Biology 2011, 12:R72
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Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL.
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TopHat2: accurate alignment of transcriptomes in the presence of
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insertions, deletions and gene fusions. . Genome Biology 2011, 14:R36
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