2015-03-27 09:27:52 +01:00
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SPAdes: a single-cell genome assembler
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SPAdes (St. Petersburg genome assembler) is intended for both standard
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isolates and single-cell MDA bacteria assemblies.
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SPAdes generates single-cell assemblies, providing information about
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genomes of uncultivatable bacteria that vastly exceeds what may be
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obtained via traditional metagenomics studies.
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Citing:
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Nurk S et al. Assembling Single-Cell Genomes and Mini-Metagenomes From
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Chimeric MDA Products. Journal of Computational Biology 20(10) (2013),
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714-737. doi:10.1089/cmb.2013.0084
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2015-11-11 06:15:11 +01:00
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NOTE: This will not build on a 32bit system.
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