2012-04-30 01:47:18 +02:00
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Clustal is a widely used, multiple sequence alignment program. This
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is Clustal Omega, the latest addition to the Clustal family. It
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offers a significant increase in scalability over previous versions,
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allowing hundreds of thousands of sequences to be aligned in only a
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few hours. In addition, the quality of alignments is superior to
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2011-09-27 12:38:20 +02:00
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previous versions, as measured by a range of popular benchmarks.
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2012-04-30 01:47:18 +02:00
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Clustal Omega is currently a command line-only tool, and is only
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suitable for aligning protein sequences, not DNA or RNA.
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If you like Clustal-Omega please cite:
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Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R,
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McWilliam H, Remmert M, Söding J, Thompson JD, Higgins DG.
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Fast, scalable generation of high-quality protein multiple sequence
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alignments using Clustal Omega. Mol Syst Biol. 2011 Oct 11;7:539. doi:
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10.1038/msb.2011.75. PMID: 21988835.
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