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15 lines
813 B
Text
15 lines
813 B
Text
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Tabix indexes a TAB-delimited genome position file in.tab.bgz and
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creates an index file in.tab.bgz.tbi when region is absent from the
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command-line. The input data file must be position sorted and
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compressed by bgzip which has a gzip like interface. After indexing,
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tabix is able to quickly retrieve data lines overlapping regions
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specified in the format "chr:beginPos-endPos". Fast data retrieval
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also works over network if URI is given as a file name and in this
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case the index file will be downloaded if it is not present locally.
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NOTE!
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Tabix is now included in htslib. This is an older version of the
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program, kept here for compatibility with Ugene. You can safely install
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it along htslib. When you start Ugene, go to Settings > Preferences >
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External Tools and manually select the legacy binary in /usr/bin/
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