2014-01-27 16:20:11 +01:00
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AmplifX: Manage, test and design your primers for PCR.
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The main purpose of AmplifX is to seek in a collection of primers,
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such as any molecular biologist get in his refrigerators, those which
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can be use to amplify a fragment into a target sequence, for example,
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and particularly, to design strategies to screen recombinant clones by
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PCR. Main features:
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Manage your primers
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- Import or easily create primer lists
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- Name,comment, sort primers
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- Share simply primer lists (automatic lockout in read only mode of
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files yet opened by an other user)
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- Automatic calculation of quality score (TM [Santa-Lucia method],
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length, GC%, autodimer, complexity, etc.)
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- Works with degenerate sequences
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Test your primers
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- Localise your primers on target sequences (main file formats
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supported and "intelligent" copy-paste)
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- Prediction of amplified sequences
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- Interactive graphic map
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- Pertinent informations on matches and amplicons (TM, size, predicted
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dimers, etc.)
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Design your primers
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- Simple and intuitive interface to design new primers for amplifying
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a fragment choosing the amplicon size and/or the position
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- Many of design options
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NOTE:
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This is just repackaging of the ready binary for x86 and will not run
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on x86_64. It will probably work fine on a Slackware multilib box.
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How to cite AmplifX:
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AmplifX X.X.X [version number] by Nicolas Jullien; CNRS, Aix-Marseille
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2016-11-14 21:47:43 +01:00
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Universite - http://crn2m.univ-mrs.fr/pub/amplifx-dist
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