mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-26 22:06:35 +01:00
17 lines
879 B
Text
17 lines
879 B
Text
|
COPASI is a package for modeling and simulation of biochemical networks,
|
||
|
|
popular in the field of systems biology.
|
||
|
|
|
||
|
|
COPASI is a stand-alone program that simulates models of biochemical
|
||
|
|
networks using ODE solvers or Gillespie's stochastic simulation
|
||
|
|
algorithm. COPASI is compatible with models in SBML format. It also
|
||
|
|
performs several analyses, such as steady state, stability, parameter
|
||
|
|
sensitivity, elementary modes, Lyapunov exponents, optimization, and
|
||
|
|
parameter estimation. Data can be visualized in plots, histograms and
|
||
|
|
animations of network diagrams. COPASI's GUI is based on QT, but a
|
||
|
|
command line version is also included that allows for processing
|
||
|
|
computations in batch mode.
|
||
|
|
|
||
|
|
COPASI is a collaboration between research groups at the Virginia
|
||
|
|
Bioinformatics Institute, University of Heidelberg, University of
|
||
|
|
Manchester and previously in the EML-Research.
|