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academic/spqr: Updated for version 2.0.1.
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
This commit is contained in:
Kyle Guinn
Willy Sudiarto Raharjo
parent
3589d04ece
commit
dd0696e586
3 changed files with 39 additions and 33 deletions
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@ -2,13 +2,12 @@ diff --git a/Demo/Makefile.am b/Demo/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Demo/Makefile.am
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@@ -0,0 +1,109 @@
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@@ -0,0 +1,111 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include $(CHOLMOD_CFLAGS) $(SUITESPARSECONFIG_CFLAGS)
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+LDADD = $(top_builddir)/Source/libspqr.la
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+
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+EXTRA_DIST = \
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+ README.txt \
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+ qrdemo_diary.txt \
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+ qrdemo_out.txt \
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+ qrdemoc_out.txt
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+
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@ -51,7 +50,8 @@ new file mode 100644
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+ $(top_srcdir)/Matrix/r2.mtx \
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+ $(top_srcdir)/Matrix/s32.mtx \
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+ $(top_srcdir)/Matrix/west0067.mtx \
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+ $(top_srcdir)/Matrix/young1c.mtx
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+ $(top_srcdir)/Matrix/young1c.mtx \
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+ $(top_srcdir)/Matrix/lp_e226_transposed.mtx
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+
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+check-local: $(check_PROGRAMS) $(MATRICES)
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+ -./qrsimple < $(top_srcdir)/Matrix/ash219.mtx
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@ -85,6 +85,7 @@ new file mode 100644
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+ -./qrdemo < $(top_srcdir)/Matrix/GD98_a.mtx
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+ -./qrdemo < $(top_srcdir)/Matrix/Ragusa16.mtx
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+ -./qrdemo < $(top_srcdir)/Matrix/young1c.mtx
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+ -./qrdemo < $(top_srcdir)/Matrix/lp_e226_transposed.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/a2.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/r2.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/a04.mtx
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@ -112,6 +113,7 @@ new file mode 100644
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+ -./qrdemoc < $(top_srcdir)/Matrix/GD98_a.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/Ragusa16.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/young1c.mtx
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+ -./qrdemoc < $(top_srcdir)/Matrix/lp_e226_transposed.mtx
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diff --git a/Doc/Makefile.am b/Doc/Makefile.am
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new file mode 100644
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--- /dev/null
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@ -169,7 +171,7 @@ diff --git a/Matrix/Makefile.am b/Matrix/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Matrix/Makefile.am
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@@ -0,0 +1,32 @@
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@@ -0,0 +1,36 @@
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+EXTRA_DIST = \
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+ README.txt
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+
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@ -201,7 +203,11 @@ new file mode 100644
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+ r2.mtx \
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+ s32.mtx \
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+ west0067.mtx \
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+ young1c.mtx
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+ young1c.mtx \
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+ Franz6_id1959_aug.mtx \
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+ Groebner_id2003_aug.mtx \
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+ lp_e226.mtx \
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+ lp_e226_transposed.mtx
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diff --git a/Source/Makefile.am b/Source/Makefile.am
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new file mode 100644
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--- /dev/null
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@ -260,7 +266,7 @@ new file mode 100644
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+ spqr_type.cpp
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+
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+libspqr_la_LIBADD = $(TBB_LIBS) $(CHOLMOD_LIBS) $(SUITESPARSECONFIG_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) -lm
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+libspqr_la_LDFLAGS = -no-undefined -version-number 1:3:1
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+libspqr_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION)
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diff --git a/ax_blas.m4 b/ax_blas.m4
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new file mode 100644
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--- /dev/null
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@ -649,7 +655,7 @@ new file mode 100644
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+# Process this file with autoconf to produce a configure script.
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+
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+AC_PREREQ([2.69])
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+AC_INIT([SPQR],[1.3.1],[DrTimothyAldenDavis@gmail.com],[spqr],[http://www.suitesparse.com/])
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+AC_INIT([SPQR],[2.0.1],[DrTimothyAldenDavis@gmail.com],[spqr],[http://www.suitesparse.com/])
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+AC_CONFIG_SRCDIR([Source/spqr_kernel.cpp])
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+AC_CONFIG_HEADERS([config.h])
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+AM_INIT_AUTOMAKE([foreign])
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@ -2,29 +2,31 @@
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# Slackware build script for SPQR
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# Copyright 2013 Kyle Guinn <elyk03@gmail.com>, USA
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# Copyright 2013-2015 Kyle Guinn <elyk03@gmail.com>, USA
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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# permitted provided that the following conditions are met:
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#
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# 1. Redistributions of this script must retain the above copyright
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# notice, this list of conditions and the following disclaimer.
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# notice, this list of conditions and the following disclaimer.
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#
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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PRGNAM=spqr
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SRCNAM=SPQR
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VERSION=${VERSION:-1.3.1}
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SRCNAM=SuiteSparse
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SUBDIR=SPQR
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VERSION=${VERSION:-2.0.1}
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SRCVER=${SRCVER:-4.4.4}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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@ -58,7 +60,7 @@ else
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fi
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# Recommended by SuiteSparse
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SLKCFLAGS="$SLKCFLAGS -fexceptions -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE"
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SLKCFLAGS="$SLKCFLAGS -fexceptions -D_FILE_OFFSET_BITS=64"
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set -e
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@ -66,14 +68,10 @@ rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf $SRCNAM
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tar xvf $CWD/$SRCNAM-$VERSION.tar.gz
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cd $SRCNAM
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tar xvf $CWD/$SRCNAM-$SRCVER.tar.gz
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cd $SRCNAM/$SUBDIR
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chown -R root:root .
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find -L . \
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\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
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-o -perm 511 \) -exec chmod 755 {} \; -o \
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\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
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-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
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chmod -R u+w,go-w,a+rX-st .
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patch -p1 < $CWD/autotoolize.diff
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patch -p1 < $CWD/atlas-threaded-blas.diff
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@ -98,6 +96,8 @@ make
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make check
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make install-strip DESTDIR=$PKG
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find $PKG/usr/lib${LIBDIRSUFFIX} -name '*.la' -delete
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a $DOCS $PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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@ -1,8 +1,8 @@
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PRGNAM="spqr"
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VERSION="1.3.1"
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HOMEPAGE="https://www.cise.ufl.edu/research/sparse/SPQR/"
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DOWNLOAD="https://www.cise.ufl.edu/research/sparse/SPQR/SPQR-1.3.1.tar.gz"
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MD5SUM="c1a55e7ac6208f7657186aa01356c8f2"
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VERSION="2.0.1"
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HOMEPAGE="http://faculty.cse.tamu.edu/davis/suitesparse.html"
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DOWNLOAD="http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.4.4.tar.gz"
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MD5SUM="e0af74476935c9ff6d971df8bb6b82fc"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES="blas lapack suitesparseconfig cholmod tbb"
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